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A new family of cyclic opioid peptide analogues related to the 1-4 sequence of dermorphin/deltorphin (Tyr-D-Aaa2-Phe-Aaa4-NH2) has been synthesized. The synthesis of the linear precursor peptides was accomplished by the solid-phase method and ring formation was achieved via a ureido group incorporating the side chain amino functions of D-Aaa2 (D-Lys, D-Orn) and Aaa4 (Lys, Orn, Dab, Dap). The peptides were tested in the guinea-pig ileum (GPI) and mouse vas deferens (MVD) assays. Most showed very high agonist potency in the GPI assay. The peptide containing D-Lys in position 2 and Dab in position 4 was 210 times more active than enkephalin, and that containing Orn and Dab, respectively, was 150 times more active than enkephalin. The latter peptide was also very active in the MVD assay, and showed an IC50 MVD/GPI ratio of 0.816. NMR spectra of selected peptides were recorded, and structural parameters were determined. The conformational space of the peptides was examined using the electrostatically driven Monte Carlo method. With the help of the NMR spectra each peptide was described as an ensemble of conformations. The conformations have been interpreted with regard to the opioid activities, and comparisons have been made with a model proposed earlier for enkephalin analogues.
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http://dx.doi.org/10.1002/psc.510 | DOI Listing |
Microb Cell Fact
September 2025
Chemical Engineering Department, School of Industrial Engineering, University of Vigo, Campus As Lagoas-Marcosende, 36310, Vigo, Spain.
In the existing literature, there is ample information available concerning the analogs constituting linear Gramicidin (Gramicidin A). However, the literature lacks information regarding the microbial production of cyclic Gramicidin S (GR-S) and the study of its analogs' amino acid composition. Thus, in this study, GR-S was produced by Aneurinibacillus aneurinilyticus, isolated from corn steep liquor (CSL) and grown in synthetic or CSL-based medium.
View Article and Find Full Text PDFEur J Med Chem
November 2025
State Key Laboratory of Bioactive Molecules and Druggability Assessment, Jinan University, Guangzhou, 510632, PR China; State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Avenida Wai Long, Taipa, 999078, Macao Special Administrative Region of Ch
De novo design of antimicrobial peptides (AMPs) offers a promising strategy to overcome the limitations of natural AMPs through rational design, providing potential solutions to address the growing risk of traditional antibiotic resistance. In this study, a series of new AMPs are generated using the α-helical template (XXFY) and its β-sheet counterpart (KFKY) (X = Lys, Dab, Orn, or Arg; F = Phe; Y = Leu, Ile, Phe, or Trp; K = Lys; n = 2, 3, 4, or 5), enabling a systematic investigation of their structure-activity relationships (SAR). The optimal peptide 27, designated as (OOFI) (O = Orn, I = Ile), demonstrates potent broad-spectrum antimicrobial activity against both standard and multidrug-resistant bacterial strains, along with low hemolytic toxicity.
View Article and Find Full Text PDFAngew Chem Int Ed Engl
July 2025
Department of Pharmacy, The First Affiliated Hospital of University of Science and Technology of China (USTC), State Key Laboratory of Precision and Intelligent Chemistry, Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui Province, 230026, Chi
The selection of twenty canonical amino acids in protein synthesis is well-established, yet the reasons behind their natural selection remain unclear. Specifically, why structurally similar analogs, such as L-2,4-diaminobutyric acid (Dab) and L-ornithine (Orn), are not chosen over L-lysine (Lys) is unknown. These analogs differ only in alkyl chain length, raising the question of whether such variations influence polypeptide stability and natural selection.
View Article and Find Full Text PDFFront Pharmacol
October 2024
ACTV Research Group, Melbourne Dental School, Division of Basic and Clinical Oral Sciences, Royal Dental Hospital and The Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Melbourne, VIC, Australia.
Introduction: Melittin is a potent antimicrobial peptide from bee venom that is effective against both Gram-positive and Gram-negative bacteria. However, it is extremely toxic to mammalian cells and, as yet, has no clinical use. Modifications to its amino acid sequence, cyclization, truncation, and dimerization have been attempted in order to reduce its toxicity whilst maintaining its antimicrobial activity.
View Article and Find Full Text PDFInt J Mol Sci
February 2023
Department of Basic Chemical Sciences, Wroclaw Medical University, Borowska 211A, 50-556 Wroclaw, Poland.
In this project, we combine two areas of research, experimental characterization and molecular docking studies of the interaction of positively charged oligopeptides with crucial blood plasma proteins. The investigated peptides are rich in NH groups of amino acid side chains from Dap, Orn, Lys, and Arg residues, which are relevant in protein interaction. The peptides are 9- and 11-mer with the following sequences: (Lys-Dab-Dab-Gly-Orn-Pro-His-Lys-Arg-Lys-Dbt), (Lys-Dab-Ala-Gly-Orn-Pro-His-Lys-Arg), and (Lys-Dab-Dab-Gly-Orn-Pro-Phe(2-F)-Lys-Arg).
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