Publications by authors named "S Deepa"

Liver aging is characterized by chronic inflammation and metabolic dysfunction that contributes to the progression of metabolic dysfunction-associated steatotic liver disease (MASLD). Necroptosis, a form of inflammatory cell death, is activated in aging livers, and genetic ( or mice) or pharmacological (RIPK1 inhibitor necrostatin-1s) inhibition of necroptosis attenuates liver inflammation and pathology. However, the cell type-specific role of necroptosis in liver aging remains unclear.

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Involvement of apoE4 in the pathology of Alzheimer's disease (AD) is hypothesized to arise from its unique structural properties, most importantly the interactions between the N- and C-terminal domains. However, structural understanding of the domain interaction is still lacking. Here, we use Hydrogen-Deuterium Exchange Mass Spectrometry (HDX-MS) to study domain interactions by measuring the effect of the C-terminal domain (CTD) on the solvent accessibility of the N-terminal domain (NTD) in both apoE3 and apoE4.

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Chronic, low-grade inflammation is a hallmark of aging and various age-related diseases, including metabolic dysfunction-associated steatotic liver disease (MASLD). The prevalence of metabolic dysfunction-associated steatohepatitis (MASH), an advanced form of MASLD, increases with age and contributes to morbidity and mortality among the elderly. This study investigates the role of necroptosis, a programmed cell death pathway that promotes inflammation, in liver inflammaging and age-associated MASLD by utilizing genetic ablation models of two key necroptosis proteins, Mlkl or Ripk3.

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Article Synopsis
  • This study investigates the role of necroptosis-induced inflammation in the progression of chronic liver disease and liver cancer in mice on a Western diet, which is high in fat and sugar.
  • Using mouse models that overexpress necroptosis-related genes (Ripk3 or Mlkl), researchers observed significantly increased liver inflammation, steatosis, and fibrosis compared to control mice on the same diet.
  • After 12 months, a higher percentage of mice with overexpressed genes developed liver tumors (62% for hRipk3-KI and hMlkl-KI mice vs. 28% for control), indicating that necroptosis-related inflammation contributes to liver disease progression in obesity.
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Apolipoprotein E4 (apoE4) is the strongest genetic risk factor for Alzheimer's disease (AD). However, structural differences between apoE4 and the AD-neutral isoform, apoE3, still remain unclear. Recent studies suggest that apoE4 harbors intermediates.

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