Publications by authors named "Jakub Grajewski"

Metal ions, including Mg(II), Ca(II), Sr(II), Co(II), Ni(II), Cu(II), Nd(III), Eu(III), and Tb(III), were investigated in binary systems alongside ampicillin at molar ratios of 1:1 and 1:2. These investigations were carried out in aqueous solutions, and the formation of complexes was verified through meticulous computational analysis. Detailed stability constants for the formed complexes and equilibrium constants for the involved reactions were meticulously determined.

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Binary systems of lanthanide ions (La, Nd, Gd, Ho, Tb, and Lu) with L-malic acid in molar ratios of 1:1 and 1:2 were studied. This study was carried out in aqueous solutions, and the composition of the formed complexes was confirmed using computer data analysis. The overall stability constants of the complexes and the equilibrium constants of the reaction were determined.

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A binary system of uridine-5'-diphosphoglucuronic acid with copper (II) ions was studied. Potentiometric studies in aqueous solutions using computer data analysis were carried out. The pH of dominance, the overall stability constants (log), and the equilibrium constants of the formation reaction (log) were determined for each complex compound formed in the studied system.

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The complexation reactions of phosphocholine and pyrimidine nucleosides as well as nucleotides with copper(II) ions were studied in the water system. Using potentiometric methods and computer calculations, the stability constants of the species were determined. Using spectroscopic methods such as UV-vis, EPR, C NMR, P NMR, FT-IR and CD, the coordination mode was established for complexes created in pH range 2.

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Macrocyclic nitrogen-containing compounds are versatile molecules. Supramolecular, noncovalent interactions of these macrocycles with guest molecules enables them to act as catalysts, fluorescent sensors, chiral or nonchiral selectors, or receptors of small molecules. In the solid state, they often display a propensity to form inclusion compounds.

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Controlled release of singlet oxygen is of interest not only to chemists, but also to biologists and medics involved in cancer therapy. Two chiral polyaza macrocyclic compounds and their corresponding endoperoxides have been synthesized. These peroxides exhibit high temperature stability, up to 80 °C.

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Article Synopsis
  • The study examined how α-hydroxy acids like L-Tartaric acid and L-Malic acid form complexes with d-electron metal ions (copper, cobalt, nickel) in aqueous solutions.
  • Potentiometric measurements and computer analysis were used to determine the stability constants of these complexes.
  • Spectroscopic methods (EPR, UV-Vis, CD, IR) revealed that dimers form with copper(II) ions while monomers form with cobalt(II) and nickel(II) ions.
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Binary complexes of tartaric acid with lanthanide(III) ions were investigated. The studies have been performed in aqueous solution using the potentiometric method with computer analysis of the data for detection of the complexes set, determination of the stability constants of these compounds. The mode of the coordination of complexes found was determined using spectroscopy, which shows: Infrared, circular dichroism, ultraviolet, visible as well as luminescence spectroscopy.

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A giant, chiral square-shaped octaimine macrocycle has been obtained in a controlled manner from readily available and inexpensive substrates: 9,10-diphenylanthracene-based dialdehyde and trans-1,2-diaminocyclohexane. Reduction of the polyimine led to a chiral octaamine characterized by a very large internal hydrophobic cavity.

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A unique combination of structural flexibility, shape persistency and functionality, makes macrocycles and molecular cages as essential molecular entities that have displayed applications that go beyond chemistry. Among macrocycles, the selectively obtained symmetrical (poly)cyclic polyimines have shown great utility in the design of molecules varied in shape and properties. The reversible and thermodynamically controlled cycloimination reaction is governed by configurational and conformational constraints imposed on the intermediate products, ensures a sufficiently high level of preorganization.

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The benzhydryl (diphenylmethyl) group is a molecular propeller that can act as a chirality reporter if it is introduced nearby a stereogenic center by making an ether bond. The hydrophobic character of the benzhydryl group allows transformation of insoluble natural tartaric acid derivatives into soluble entities in a nonpolar environment. Electronic circular dichroism spectra, recorded within the short-wavelength region of the phenyl B transitions (190-200 nm) shows strong bisignate Cotton effects.

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Trityl group, Tr, is a molecular dynamic rotor of which the conformation and helicity depend on other groups in the close vicinity. Interactions with another covalently linked Tr group and with other substituents are analyzed in terms of transfer of chirality to the trityl group. Two trityl groups in a molecule can mutually interact at a distance of two, three, or five bonds.

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Article Synopsis
  • The study focused on three series of 1,3,4-oxadiazoles using (17)O NMR spectroscopy to analyze their properties.
  • The researchers correlated the chemical shift values obtained from the spectroscopy with empirical Hammett parameters, which helps predict the behavior of substituents in organic compounds.
  • They also compared these shifts to calculated bond lengths and chemical shielding values to gain a deeper understanding of the molecules' structures.
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Ten fluoronitroanilines have been synthesized and the (1)H, (13)C, (15)N and, (19)F NMR spectra of these compounds have been recorded and fully assigned. Density functional theory(DFT) calculations have been performed for all compounds studied. Experimental and theoretical results are compared and the structure and atom character influence on the accuracy of the calculation discussed.

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New chiral derivatizing reagents (CDAs) derived from trans-1,2-diaminocyclohexane, having an electron-deficient aromatic substituent (either an aromatic imide or 3,5-dinitrobenzamide) and rigid structure (either an amide or a urea linker), are reported. Significant shift differences of diastereotopic protons in the 1H NMR signals are observed for enantiomers of suitably protected alpha-amino acids, linked to CDA by a covalent bond. A simple, general model rationalizing the observed enantiomer discrimination and based on semiempirical conformational search is presented.

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Article Synopsis
  • The study analyzed substituted 2-(phenylamino)-5-phenyl-1,3,4-oxadiazoles using 15N NMR spectroscopy to identify chemical structures.
  • Signals from the NMR data were interpreted through advanced techniques like HMQC and HMBC.
  • Chemical shifts were compared to Hammett parameters and calculated electron densities to better understand their electronic characteristics.
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  • Tetra- and trifluoronitroanilines were analyzed using electrospray ionization mass spectrometry, showing only negative-ion signals.
  • In-source fragmentation at increased cone voltage helped distinguish between isomers, with para-nitroanilines favoring NO(2) loss more than ortho derivatives.
  • The pattern of fluorine substitution on the aromatic ring influenced fragmentation, as seen in 2,3,6-trifluoro-4-nitroaniline losing NO followed by HF, unlike 2,3,5-trifluoro-4-nitroaniline.
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Trianglamines, macrocyclic heteraphanes, were readily synthesised through a [3+3] cyclocondensation of (R,R)-1,2-diaminocyclohexane with terephthalaldehyde, followed by NaBH4 reduction and N-alkylation. The macrocyclic ring shows a remarkable ability to change its conformation, as a consequence of rotation about the C-N bonds or nitrogen inversion due to protonation or N-alkylation, as revealed by circular dichroism spectra, computational modelling and X-ray diffraction analysis. The flexible natures of the trianglamine macrocycles allow ready accommodation of a variety of guest molecules to form crystalline inclusion complexes of highly diversified interpenetrating structures.

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The four-carbon chain in (R,R)-tartaric acid derivatives is predominantly antiperiplanar (trans) in the acid, its salts, esters, and NH-amides, while (-)-synclinal (gauche) conformer is the most abundant in N,N'-tetraalkyltartramides. Trialkylsilylation or tert-butylation of the hydroxy groups at C2 and C3 does not appear to affect the conformational preference of NH-tartramides, but it does change the conformational equilibrium in the case of tartrates (toward (-)-gauche) and N,N'-tetraalkyltartramides (toward trans), as judged from the NMR data. X-ray diffraction data point to the stabilizing role of antiparallel dipole-dipole interactions due to the 1,3-CO/CH bonds.

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A simple nonempirical method for the assignment of absolute configuration of N-phthalimidosulfoximines and related S-chiral sulfoxides, based on exciton-coupled circular dichroism, is presented.

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Chiral oligomeric diimides prepared from pyromellitic dianhydride, (R,R)-1,2-diaminocyclohexane and phthalic anhydride fold into M or P helical conformers; trimer 1 folds into the P conformer in the crystal but the M conformer dominates in solution; longer chain oligomers 2 and 3 form preferentially P conformers in solution, as a result of intermolecular interactions.

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