Publications by authors named "Hye Ran Kim"

VPS26A, a core component of the retromer complex, is pivotal to endosomal trafficking and membrane protein recycling. However, its expression profile, prognostic significance, and clinical relevance in liver hepatocellular carcinoma (LIHC) remain unexplored. This study investigates the prognostic potential of VPS26A by extensively analyzing publicly available LIHC-related databases.

View Article and Find Full Text PDF

Microvilli on T cells differ from those on epithelial cells, exhibiting filopodia-like characteristics that facilitate the clustering of molecules essential for sensing and cell migration. Recently, they have also been recognized as the structures from which T cell immunological synaptosomes (TIS) are released. In this study, we examined a key determinant of microvilli organization during T cell development and explored the functional roles of these structures, particularly in relation to T cell behaviors.

View Article and Find Full Text PDF

: Chromobox 1 (CBX1), a key epigenetic regulator involved in chromatin remodeling, has been implicated in various cancers; however, its role in liver hepatocellular carcinoma (LIHC) remains underexplored. This study aimed to investigate the expression patterns, epigenetic regulation, and non-coding RNA (ncRNA) networks involving CBX1 in LIHC, assess their potential as diagnostic and prognostic biomarkers, and explore their relevance as a putative therapeutic target. : A multi-omics bioinformatics approach was employed using datasets from GEPIA2, OncoDB, UALCAN, Human Protein Atlas, KM Plotter, MethSurv, miRNet, and ENCORI.

View Article and Find Full Text PDF

Objective: Changes in ambient temperature negatively impact livestock productivity, with thermal stress causing physiological changes that affect beef quality and quantity. The calf stage is critical, as thermal stress during this period can have lasting effects on productivity. This study examined the impact of weather conditions on calf growth, carcass traits, and their interrelationships in Korean native Hanwoo steers.

View Article and Find Full Text PDF

High environmental temperatures lead to metabolic changes, body weight reduction, and high mortality in chickens, affecting poultry production worldwide. This study aimed to evaluate the effects of heat stress, assessed by the temperature-humidity index (THI), on the growth performance, physiological response, carcasses, and hematological traits of broilers. A total of 200 broilers (between 17 and 31 days old) were kept in thermoneutral conditions (21 °C; 60% relative humidity, RH) for 3 days during the adaptation period, followed by 14 days of exposure to the experimental treatments.

View Article and Find Full Text PDF

Purpose: The fifth World Health Organization (WHO) classification (2022 WHO) and International Consensus Classification (ICC) of myeloid neoplasms have recently been published. In this study, patients were reclassified according to the revised classification and their prognoses were analyzed to confirm the clinical utility of the new classifications.

Methods: We included 101 adult patients, 77 with acute myeloid leukemia (AML) and 24 with myelodysplastic neoplasms (MDS), who underwent bone marrow aspiration and next-generation sequencing (NGS) between August 2019 and July 2023.

View Article and Find Full Text PDF

Multiple myeloma (MM) is an incurable hematologic cancer that originates from plasma cells and occurs primarily in patients over 60. The prognosis of MM has improved after the introduction of new treatments, such as thalidomide, bortezomib, and lenalidomide. However, in recurrent and refractory MM patients, factors such as age and drug toxicity are important when choosing treatment options.

View Article and Find Full Text PDF
Article Synopsis
  • The study focused on the effects of 7 days of heat stress on early lactating Holstein cows in controlled settings, comparing low-temperature, low-humidity (LTLH) and high-temperature, high-humidity (HTHH) conditions.
  • The HTHH group experienced significant negative impacts, including a 12% drop in dry matter intake, a 23% increase in water intake, and reductions in milk yield and protein production by 10% and 20%, respectively.
  • Additionally, physiological changes were noted in the HTHH group, such as altered blood parameters (reduced white blood cells and increased glucose), heightened stress indicators (elevated cortisol), and increased body temperatures, demonstrating their greater vulnerability to heat stress compared
View Article and Find Full Text PDF
Article Synopsis
  • High temperatures and humidity affect laying hens, with a study measuring their performance and health under different temperature-humidity index (THI) conditions over 28 days.
  • Severe heat stress led to a notable decrease in feed intake (30%) and egg production rate (11%) in hens compared to normal conditions, along with reduced egg quality indicators like yolk color and eggshell strength.
  • Physiological changes were evident, showing higher serum potassium (K) and lower sodium (Na) levels in hens under severe heat stress, indicating that heat significantly disrupts their metabolism and overall performance.
View Article and Find Full Text PDF
Article Synopsis
  • * A study showed that while immunity against MERS-CoV declined over five years, some recovered patients had increased antibody levels during the COVID-19 pandemic, likely due to cross-reactive immunity from SARS-CoV-2 vaccinations or infections.
  • * Key immunogenic regions of CoVs, such as specific epitopes from the spike protein, showed strong immune responses during the pandemic, suggesting that targeting these regions could aid in developing a pan-CoV vaccine.
View Article and Find Full Text PDF

Exosomes, pivotal in intercellular communication during skin disease pathogenesis, have garnered substantial attention. However, the impact of environmental pollutants, such as benzo[a]pyrene (BaP) and 2, 3, 7, 8-tetrachlorodibenzo-p-dioxin (TCDD), on exosome release amid inflammatory skin diseases remains unexplored. This study addresses this gap by examining the influence of BaP and TCDD on exosome function, specifically focusing on immune-related pathway alterations in normal recipient keratinocytes and peripheral blood mononuclear cells (PBMCs).

View Article and Find Full Text PDF

Background: The prognostic significance of CDC42 effector protein 2 (CDC42EP2) and its association with tumor-infiltrating immune cells (TIICs) have not been explored in liver hepatocellular carcinoma (LIHC). This study aims to assess the potential prognostic value of CDC42EP2 by conducting a comprehensive analysis of online databases pertaining to LIHC.

Methods: We evaluated the potential of CDC42EP2 as a prognostic biomarker by utilizing online databases such as TIMER, GEPIA2, KM, OSlihc, HPA, and LinkedOmics.

View Article and Find Full Text PDF

Introduction: Exosomes play a key role in cell communication and are involved in both pathological and physiological processes. Autophagy dysfunction and oxidative stress are linked to immune-mediated inflammatory diseases such as psoriasis. Stem cell-derived exosomes exhibit immunomodulatory and antioxidant efficacy.

View Article and Find Full Text PDF

Chub mackerels (Scomber japonicus) are a migratory marine fish widely distributed in the Indo-Pacific Ocean. They are globally consumed for their high Omega-3 content, but their population is declining due to global warming. Here, we generated the first chromosome-level genome assembly of chub mackerel (fScoJap1) using the Vertebrate Genomes Project assembly pipeline with PacBio HiFi genomic sequencing and Arima Hi-C chromosome contact data.

View Article and Find Full Text PDF
Article Synopsis
  • Vitiligo is a skin condition characterized by loss of pigmentation due to melanocyte destruction, and previous studies suggested a link between low vitamin D levels and the disease.
  • This study tested the effectiveness of combining cholecalciferol (a form of vitamin D) injections with excimer laser treatment versus using the laser alone in patients with vitiligo and low vitamin D levels.
  • Results showed that patients receiving both treatments had a much greater improvement in their vitiligo area scores compared to those who only received the laser treatment, indicating that adding vitamin D could enhance treatment outcomes.
View Article and Find Full Text PDF
Article Synopsis
  • SH and UA are marine waste resources affecting Jeju Island's environment and economy; their anti-diabetic properties were analyzed for potential reuse as health additives.
  • Both extracts showed alpha-glucosidase inhibitory activity, with UA being more effective than SH, particularly in insulin-resistant HepG2 cells, improving glucose uptake and glycogen levels.
  • In a rat study, oral administration of SH and UA improved weight gain and alleviated insulin resistance and oral glucose tolerance, suggesting their potential as therapeutic agents to combat diabetes.
View Article and Find Full Text PDF
Article Synopsis
  • Most vitamin D is synthesized in the skin from sunlight, with a small percentage obtained from food; it's crucial for bone health and immune function.
  • The study analyzed maternal vitamin D levels during pregnancy and their effects on fetal growth, finding that while hematologic and serological impacts were minimal, vitamin D levels were linked to increased femur and humerus lengths in the fetus.
  • The research suggests maternal vitamin D may help reduce rates of sexually transmitted infections and is important for fetal bone development, highlighting the need for vitamin D sufficiency through diet or sunlight exposure.
View Article and Find Full Text PDF

AAV: adeno-associated virus; ATF3: activating transcription factor 3; ATG7: autophagy related 7; AVIL: advillin; cADPR: cyclic ADP ribose; CALC: calcitonin/calcitonin-related polypeptide; CMT: Charcot-Marie-Tooth disease; cKO: conditional knockout; DEG: differentially expressed gene; DRG: dorsal root ganglion; FE-SEM: field emission scanning electron microscopy; IF: immunofluorescence; NCV: nerve conduction velocity; PVALB: parvalbumin; RAG: regeneration-associated gene; ROS: reactive oxygen species; SARM1: sterile alpha and HEAT/Armadillo motif containing 1; : synapsin I.

View Article and Find Full Text PDF

Cholesterol (CL) is required for various biomolecular production processes, including those of cell membrane components. Therefore, to meet these needs, CL is converted into various derivatives. Among these derivatives is cholesterol sulfate (CS), a naturally produced CL derivative by the sulfotransferase family 2B1 (SULT2B1), which is widely present in human plasma.

View Article and Find Full Text PDF

This study aimed to establish an efficient plant regeneration system from leaf-derived embryogenic structure cultures of . To induce embryogenic structures, fully expanded leaf explants of were cultured on Murashige and Skoog (MS) medium supplemented with 0, 0.1, 0.

View Article and Find Full Text PDF

Although T cell activation is known to involve the internalization of the T cell antigen receptor (TCR), much less is known regarding the release of TCRs following T cell interaction with cognate antigen-presenting cells. In this study, we examine the physiological mechanisms underlying TCR release following T cell activation. We show that T cell activation results in the shedding of TCRs in T cell microvilli, which involves a combined process of trogocytosis and enzymatic vesiculation, leading to the loss of membrane TCRs and microvilli-associated proteins and lipids.

View Article and Find Full Text PDF
Article Synopsis
  • - This study investigates the metabolic differences between lab-grown adventitious roots and standard medicinal parts by optimizing in vitro culture conditions such as IBA concentrations and media types.
  • - Optimal conditions for adventitious root growth were established using Murashige and Skoog medium with 5 mg/L IBA, leading to successful cultivation for further analysis.
  • - Using techniques like FT-IR spectroscopy, the study distinguished metabolic profiles of adventitious roots from standard parts, indicating potential for commercial production and screening of desirable root lines.
View Article and Find Full Text PDF

In addition to microvilli's role as structural scaffold for TCR clustering, we recently discovered a novel function as message senders. We found that microvilli are separated from the T cell body shortly upon TCR stimulation and vesiculated to form T cell microvilli particles (TMPs), a new type of membrane vesicles. TMPs and synaptic ectosomes, which bud from the synaptic cleft, constitute "T cell immunological synaptosomes (TISs)" and act as conveyors of T cell messages or traits to cognate antigen-presenting cells.

View Article and Find Full Text PDF