Publications by authors named "Andrew S Lyon"

Biomolecular condensates regulate cellular function by compartmentalizing molecules without a surrounding membrane. Condensate function arises from the specific exclusion or enrichment of molecules. Thus, understanding condensate composition is critical to characterizing condensate function.

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Article Synopsis
  • Fragmentation ion spectral analysis is a key technique in proteomics for studying protein interactions and structures, and Kojak version 2.0 is an updated tool designed for identifying cross-linked peptides from these analyses.
  • The new version includes improved algorithms, better scoring metrics, support for cleavable cross-linkers, and the ability to identify cross-links in specific protein structures, making it more versatile in experimental setups.
  • Kojak 2.0 integrates with the Trans-Proteomic Pipeline for additional analytical tools and remains open-source and compatible across multiple platforms.
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Microtubule (MT) nucleation is regulated by the γ-tubulin ring complex (γTuRC), conserved from yeast to humans. In , γTuRC is composed of seven identical γ-tubulin small complex (γTuSC) sub-assemblies, which associate helically to template MT growth. γTuRC assembly provides a key point of regulation for the MT cytoskeleton.

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Biomolecular condensates are found throughout eukaryotic cells, including in the nucleus, in the cytoplasm and on membranes. They are also implicated in a wide range of cellular functions, organizing molecules that act in processes ranging from RNA metabolism to signalling to gene regulation. Early work in the field focused on identifying condensates and understanding how their physical properties and regulation arise from molecular constituents.

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The microtubule (MT) cytoskeleton plays important roles in many cellular processes. In vivo, MT nucleation is controlled by the γ-tubulin ring complex (γTuRC), a 2.1-MDa complex composed of γ-tubulin small complex (γTuSC) subunits.

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